Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKSQEPTAALDAEQVAAYLSQHPEFFVEHDELIPELRIPHQPGDAVSLVERQVRLLRERNIEMRHRLSQLMDVARENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSLRHEFQVPYVSLILFSDSSVS-VG---RSVSSAEA--------HQAIGGLLSGGKTVCGV-LRPHELAFLFGESDRDEIGSAAVVSLSF-QGLHGVLAIGSPDPQHYKSSLGTLFLGYVAEVLARVLPRFSSPLRSVR
3CI6 Chain:A ((5-168))
------------------------------------------------------------------------------SNMQLDTLRRIVQEINSSVSLHDSLDIMVNQVADAMKVDVCSIYLLDERNQRYLLMASKGLNPESVGHVSLQLSEGLVGLVGQREEIVNLENASKHERF---------IYNSFLGVPVMYRRKVMGVLVVQNKQPQDFSEA-AESFLVTLCAQLSGVIAHAHAVG----
General information:
TITO was launched using:
RESULT:
Template:
3CI6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116228 for 1034 contacts (-112.4/contact) +
2D Compatibility (PS) -15122 + (NN) -6578 + (LL) 7808
1D Compatibility (HY) -8000 + (ID) 1250
Total energy: -139370.0 ( -134.79 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_3CI6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CI6-query.scw
PDB file :
Tito_Scwrl_3CI6.pdb
: