Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLVTAIIKPFKLDDVRESLSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIDVAIADDQLDRVIEAITKAANTGKIGDGKIFVVNLEQAIRIRTGETDTDAI
4CO0 Chain:A ((1-112))
MKLVMAIIKPFKLDEVREALTSLGIQGLTVSEVKGFGR---QTEIYRGAEYSVSFLPKVKVEVAVSDDQYEQVVEAIQKAANTGRIGDGKIFVLDIAQAVRIRTGETNTEAL
General information:
TITO was launched using:
RESULT:
Template:
4CO0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63280 for 702 contacts (-90.1/contact) +
2D Compatibility (PS) -11959 + (NN) -1714 + (LL) 12
1D Compatibility (HY) -14800 + (ID) 3900
Total energy: -95641.0 ( -136.24 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_4CO0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CO0-query.scw
PDB file :
Tito_Scwrl_4CO0.pdb
: