Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGPGQTLLIPTGLSIYIADPGLAALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGESPFTIAVGERIAQLVLVPVVQAHFELVEAFDESQRGAGGFGHSGSH
1SYL Chain:A ((2-137))
MKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLNDAVELAPGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLINSDYQGQLMISVWNRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDFD---------------
General information:
TITO was launched using:
RESULT:
Template:
1SYL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100212 for 935 contacts (-107.2/contact) +
2D Compatibility (PS) -14615 + (NN) -3933 + (LL) -256
1D Compatibility (HY) -18000 + (ID) 4800
Total energy: -141816.0 ( -151.67 by residue)
QMean score : 0.396
(partial model without unconserved sides chains):
PDB file :
Tito_1SYL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SYL-query.scw
PDB file :
Tito_Scwrl_1SYL.pdb
: