Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINKDSLTHHISQQFNAELEDVRSHLLAMGGLVEKQVNDAVNALIDADSGLAQQVREIDDQINQMERNIDEECVRILARRQPAASDLRLIISISKSVIDLERIGDEASKVARRAIQLCEEGESPRGYVE-VRHIGSQVQKMVQEALDAFARFDADLALSVAQYDKTVDREYKTALRELVTYMMEDPRAISRVLNIIWALRSLERIGDHARNIAELVIYLVRGTDVRHIGLTRMKEEVENNRGE
1SUM Chain:B ((5-210))
--------------LNEKVEEFKKGVLKAGWFIEKMFRNSISSLVERNESLAREVIADEEVVDQMEVEIQEKAMEVLGLFSPIGKPLLTVTAGIRVAELIENIADKCHDIAKNVLELMEE--PPLKPLEDIPAMANQTSEMLKFALRMFADVNVEKSFEVCRMDSKVDDLYEKVREELLLYMMESPKYVKRALLLLEIAGNIEIIADYATNIVEVSVYMVQG---------------------
General information:
TITO was launched using:
RESULT:
Template:
1SUM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105084 for 1645 contacts (-63.9/contact) +
2D Compatibility (PS) -22398 + (NN) -12987 + (LL) 2276
1D Compatibility (HY) -16400 + (ID) 2850
Total energy: -157443.0 ( -95.71 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_1SUM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SUM-query.scw
PDB file :
Tito_Scwrl_1SUM.pdb
: