Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEAASCARKGTKYAEGTQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKDPKKWAMPFQSYVTLTMLQSHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEWYKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWLIHQRRPQSCKVLVLDADLNLENIGTEYQRSESSIFDAISSNQQPSPVLVSPSKRQRVAR
1J90 Chain:B ((18-208))
-----------------TQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKDPKKWAMPFQSYVTLTMLQSHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEWYKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWLIHQRRPQSCKVLVLDAD------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1J90.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95794 for 1467 contacts (-65.3/contact) +
2D Compatibility (PS) -20956 + (NN) -11890 + (LL) 3596
1D Compatibility (HY) -29200 + (ID) 9550
Total energy: -163794.0 ( -111.65 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_1J90.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J90-query.scw
PDB file :
Tito_Scwrl_1J90.pdb
: