Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MLLCFRFGNQSMKRENFTLITDFVFQGFSSFHEQQITLFGVFLALYILTLAGNIIIVTIIRMDLHLHTPMYFFLSMLSTSETVYTLVILPRMLSSLVGMSQPISLAGCATQMFFFVTFGITNCFLLTAMGYDRYVAICNPLRYM--------------------------------------------------VIMNKRLRIQLVLG---ACSIGLI--VAITQVTS-------VFRLPFCARKVPHFFCDIRPVMKLSCIDTTVNEILTL--IISVLVLVVPMGLVF-----ISYVLIISTILKIAS----------VEGRKKAFATCASHLTVVIVHYSCASIAYLKPKSENTREHDQLISVT---YTVITPLLNPVVYTLRNKEVKDALCRAVGGKFS---------------------- |
| 2W7O Chain:A ((15-501)) | KEKINKIIMEATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKAQLQVDRFAMELEQS---RNLSNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEERQNWPEDKRRYFIKQNSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQAVMDFIKDL-PIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGSTHLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKERLKGRTVTIKLKNVNFEVKTRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMGVRISSFPNE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -284730 for 2137 contacts (-133.2/contact) +
2D Compatibility (PS) -31997 + (NN) 3654 + (LL) 712
1D Compatibility (HY) 800 + (ID) 2250
Total energy: -313811.0 ( -146.85 by residue)
QMean score : 0.149
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