Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKSLLVKAGRKFED-YKGSMNPPVYHSSTILFPTYKDYLDAADGKNIYGVVNDGIARDYSYGSVGTPTVHYFSNALAEIEGRGQALIYPSGLFALTFAILTFARAGSHVLIQDNSYYRLRRFAENELPKRRVEVTFYDP-T-QDIASLIQSNTRLIMIETPGSVTFEVSNIEHIVKIAKEH-KIVTVCDNSWATPLLFRPLDYGIDVALYGVTKYIAGHSDLLMGAIIAE-GEVFKLLYEICKNYGVTVQPYDCYLAHRGLRTLGTRMRKHQSTAMKVAKWLEKHSKIKKVLYPALPSHPQHELWKSYFKGASGVFSIVLDREYSCEELSCMVDHMKIFSIGASWGGCDSLILPIDRKSVSRSVMSS----DYSGSFIRIFCGLEDPEDLISDLNAALARLPCLGFQADEVGHDTKRITA |
| 3COG Chain:A ((18-400)) | -HFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQ--------------------------------GNPTRNCLEKAVAALDGAKYCLAFASGLAATVT-ITHLLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTL--QHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAHP----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3COG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -281882 for 3234 contacts (-87.2/contact) +
2D Compatibility (PS) -39694 + (NN) -23587 + (LL) 2320
1D Compatibility (HY) -24000 + (ID) 5800
Total energy: -372643.0 ( -115.23 by residue)
QMean score : 0.597
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