Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQLESEQQFESLKQGATVFEFTAGWCPDCRVIEPDLPELEARYP-MFDFVSVDRDKFMDICIENGIMGIPSFLVYKNGELLGSYIGKERKS--IEQIDAFLAQYV
3DXB Chain:A ((31-118))
---------------GAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA---
General information:
TITO was launched using:
RESULT:
Template:
3DXB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49435 for 555 contacts (-89.1/contact) +
2D Compatibility (PS) -9265 + (NN) -1049 + (LL) 1960
1D Compatibility (HY) -4800 + (ID) 1500
Total energy: -64089.0 ( -115.48 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_3DXB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DXB-query.scw
PDB file :
Tito_Scwrl_3DXB.pdb
: