Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNLNWAILGPGSIAHE-FAEGMRGM--NREIYAVGARSLEKGQAFASQYGIENVYDDFDKMLADPAIDVVYIATPHSNHYEFIMKSLHNGKHVLAEKAITVSSKELNEINVLAKEKGLIVKEAMTIFHMPLYKKLREIVESGAIGKLKIIQVAFGSAKE----KDPKNRFYNMDLAGGALLDIGTYALSFARYFLSETPDEVLTTMKK--FETGVDEQSGILLKNNEEELAVVSLSFRAKMPKRGVIACEEGFITVDEYPRASRATVTHTATGKVEEIEVGETSKALEYEITAMEESVATG-E-N-MTYQLTNDVIAIMSDVRTQWGIKFPFEK |
1ZH8 Chain:A ((16-337)) | LRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKAKELVESGAIGDPVFMNWQIWVGMDENNKYVHTDWRKKPKHVGGFLSDGGVHHAAAMRLILGEI-EWISAVAKDLSPLLGGMDFLSSIFEFENGTVGNYTISYSLKGNERFEITGTKGKISISWD----KIVLNE--E----EMK-VPQENSYQKEFEDFYQVVAEGKPNDLGSPVQALKDLAFIEACVRSAGNKVFVS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178051 for 2656 contacts (-67.0/contact) +
2D Compatibility (PS) -33256 + (NN) -8927 + (LL) 576
1D Compatibility (HY) -8000 + (ID) 3350
Total energy: -231008.0 ( -86.98 by residue)
QMean score : 0.557
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