Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLLVDGKWVDQWYDTASTGGKFVRTVTQFRHWVTKDGSAGPSGDAGFKAESGRYHLYVSLACPWASRVLIMRKLKNLESHI-SISIVNPLMLENGWTFQEYKGVIPDMINQSQYLYQIYQASQSDYTGRVTVPVLWDKKCHTIVNNESSEIMRMLNTAFNHITGNTDDYYPD--------SLQGQIDEMNNFIYPKINNGVYKAGFATSQNVYQKEVETLFTALDQLEKHLSDNHYLVG---EQFTEADIRLFTTLVRFDTVYYGHFKCNLKALHDYPHLWHYTKRIYNLPGIAETVNFDHIKKHYYGSHKTINPTGIIPAGPNLDWTI |
| 1OYJ Chain:A ((3-224)) | --------------------------------------------------EEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLG--------------------------NKSDLLLRSNPVH-R--KIPVLLHA--G-RPVSESLVILQYLDDAFPG----TPHLLPPANSGADAAYARATARFWADYVDRKLYDCGSRLWRL-KGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYER-CG--GFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKYGV------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OYJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130202 for 1683 contacts (-77.4/contact) +
2D Compatibility (PS) -21559 + (NN) -1966 + (LL) 4136
1D Compatibility (HY) -5200 + (ID) 1700
Total energy: -156491.0 ( -92.98 by residue)
QMean score : 0.429
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