Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLKHIVLGLALTTLLGVTFSNQEVSASSTSSKVVKVGVMTFSDTEKARWDKIEKLVG-DKAKIKFTEFTDYTQPNQATANKDVDINAFQHYNFLENWNKENKKNLIPLEKTYLAPIRIYSEKVKSLKKLKKGATIAIPNDATNGSRALYVLQSAGLIKLNVSGKK-VATVANITSNKKDINIQELDASQTPRALKDVDAAIINNTYIEQANLKPSDAIFVEKSDKNSKQWINIIAGRKNWKKQKNAKAIQAILDAYHTDEVKKVIKDTSADIPQW
3IR1 Chain:A ((2-229))---------------------------------EIVFGTTVGDF-GDMVKEQIQPELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKPYLDDFKKEHNLDITEVFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARVLVMLDELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYAISSGMKLT-EALFQEP---SFAYVNWSAVKTAD-K--DSQWLKDVTEAYNSDAFKAYAHKRFEGYKSP


General information:
TITO was launched using:
RESULT:

Template: 3IR1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45197 for 1843 contacts (-24.5/contact) +
2D Compatibility (PS) -23598 + (NN) -3977 + (LL) 2672
1D Compatibility (HY) -11200 + (ID) 3500
Total energy: -84800.0 ( -46.01 by residue)
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_3IR1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IR1-query.scw
PDB file : Tito_Scwrl_3IR1.pdb: