Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLKHIVLGLALTTLLGVTFSNQEVSASSTSSKVVKVGVMTFSDTEKARWDKIEKLVG-DKAKIKFTEFTDYTQPNQATANKDVDINAFQHYNFLENWNKENKKNLIPLEKTYLAPIRIYSEKVKSLKKLKKGATIAIPNDATNGSRALYVLQSAGLIKLNVSGKK-VATVANITSNKKDINIQELDASQTPRALKDVDAAIINNTYIEQANLKPSDAIFVEKSDKNSKQWINIIAGRKNWKKQKNAKAIQAILDAYHTDEVKKVIKDTSADIPQW |
3IR1 Chain:A ((2-229)) | ---------------------------------EIVFGTTVGDF-GDMVKEQIQPELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKPYLDDFKKEHNLDITEVFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARVLVMLDELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYAISSGMKLT-EALFQEP---SFAYVNWSAVKTAD-K--DSQWLKDVTEAYNSDAFKAYAHKRFEGYKSP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IR1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45197 for 1843 contacts (-24.5/contact) +
2D Compatibility (PS) -23598 + (NN) -3977 + (LL) 2672
1D Compatibility (HY) -11200 + (ID) 3500
Total energy: -84800.0 ( -46.01 by residue)
QMean score : 0.452
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