Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRKWAN------IVAKKTAKDGANSKVY---------AKFGVEIYVAAKQGEPDPESNSALKFVLDRAKQAQVPKH--VIDKAIDKAKGNTDETFVEGRYEGFGPNGSMIIVDTLTSNVNRTAANVRTAYGKNG-----------------GNMGASGSVSYLFDKKGV---IVFAGDDADTVFEQLLEADVDVDDVEAEEGTITVYTAPTDLHKGIQALRDNGVEEFQVTELEMIPQSEVVLEGDDLETFEKLIDALESDDDVQKVYHNVADF----------------------------------------------------------------------------- |
| 2GP5 Chain:A ((1-347)) | ASESETLNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYDDIDDLVIPAPIQQLVTGQSGLFTQYNIQKKAMTVREFRKIANSDKYCTPRYSEFEELERKYWKNLTFNPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKK-----YGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYKLWKAGKDNTVIDHTLPTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GP5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 31710 for 1526 contacts (20.8/contact) +
2D Compatibility (PS) -24378 + (NN) 2254 + (LL) 680
1D Compatibility (HY) -3600 + (ID) 1400
Total energy: 5266.0 ( 3.45 by residue)
QMean score : 0.032
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