Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKILFFGEPLIRITPKENDYFADSISTKLFYGGSEVNTARALQGFGQDTKLLSALPNNPIGNSFLQFLKAQGIDTHSIQW-VGERVGLYFLEDSF---ACRKGEVVYDRDHSSLHDFRINQIDFDQLFEGVSLFHFSGITLSLDESIQEITLLLLKEAKKREITISLDLNFRSKLISPKNAKILFSQFATF--ADICFGIEPLMVDS-QDTTFFNRDEATIEDVKERMISLINHFDFQVIFHTKRLQDEWGRNHYQAYIANRKQEFVTSKEITTAVNQRIGSGDAFVAGALYQLLQHSDSKTVIDFAVASASLKCALEGDNMFETV-TAVNKVLNQSKDIIR |
2DCN Chain:A ((2-309)) | -AKLITLGEILIEFNALSPGPLRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLK-SESIYYRKG-SAGSKLSPEDVDEE-YVKSADLVHSSGITLAISSTAKEAVYKAFEIA----SNRSFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILGES-----------DPDKAAKAFSD--YAE-----IIVMKLGPKG---AIVYYDG-KKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFEMEKALDYAIVASTLNVMIRGDQENLPTTKDIETFLREM----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DCN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99942 for 2739 contacts (-36.5/contact) +
2D Compatibility (PS) -31832 + (NN) -8402 + (LL) 3344
1D Compatibility (HY) -9200 + (ID) 2700
Total energy: -148732.0 ( -54.30 by residue)
QMean score : 0.425
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