Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIADVLRNKGAAVVTINPDATVGELLAGLAE-----QNIGAMVVVGAEG-VVGIVSERDVVRQLHTYGASVLSRPVAKIMSTTVATCTKSDTVDKISVLMTENRVRHVPVLD-GKKLIGIVSIGDVVKSRMGELEAEQQQLQSYITQG
2OUX Chain:A ((138-263))
-TAGAIM---TTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVND-------DDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDEAAS------------
General information:
TITO was launched using:
RESULT:
Template:
2OUX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94556 for 859 contacts (-110.1/contact) +
2D Compatibility (PS) -12531 + (NN) -2158 + (LL) 1644
1D Compatibility (HY) -10400 + (ID) 1400
Total energy: -119401.0 ( -139.00 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_2OUX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OUX-query.scw
PDB file :
Tito_Scwrl_2OUX.pdb
: