Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHVC---HTIADVVDRAKAERSENTLRKDFTPSE---------------LLAAGRRIAELERPKAKQRQREGGDHGRQARYSGLGSMEPKPESERDAHKADTAISEALGISRGHYQRLKR-IDNATRSEAGYRDGLNGWSG |
1ETE Chain:A ((1-134)) | TQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTVASNLQDDELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPS---CLRFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQP---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ETE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21504 for 746 contacts (28.8/contact) +
2D Compatibility (PS) -12060 + (NN) -2859 + (LL) -40
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: 3545.0 ( 4.75 by residue)
QMean score : 0.195
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