Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLSDGEWQLVLNVWGKVEADIPGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPLAQSHATKHKIPVKYLEFISECIIQVLQSKHPGDFGADAQGAMNKALELFRKDMASNYKELGFQG
2O5M Chain:X ((1-152))
-GLSDGEWQQVLNVWGKVEADIAGHGQEVLIRLFTGHPETLEKFDKFKHLKTEAEMKASEDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLHSKHPGDFGADAQGAMTKALELFRNDIAAKYKELGFQ-
General information:
TITO was launched using:
RESULT:
Template:
2O5M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71969 for 1118 contacts (-64.4/contact) +
2D Compatibility (PS) -16403 + (NN) -10974 + (LL) 36
1D Compatibility (HY) -17200 + (ID) 6700
Total energy: -123210.0 ( -110.21 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_2O5M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O5M-query.scw
PDB file :
Tito_Scwrl_2O5M.pdb
: