Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSYKENLNPSSYTSKFTTPSSATAAQRVLRKEPYVSTFTTPSDNLLAQRTQLSRITPSASSSVPGRVAVSTEMPSQNTALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHA-PSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQSTQSK
3COK Chain:A ((9-267))----------------------------------------------------------------------------------------KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK---------------------------ESDVWSLGCMFYTLLIGRPPFDTDTVK-----VVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMS-----------------


General information:
TITO was launched using:
RESULT:

Template: 3COK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139445 for 1662 contacts (-83.9/contact) +
2D Compatibility (PS) -23855 + (NN) -13328 + (LL) 7484
1D Compatibility (HY) -25600 + (ID) 4200
Total energy: -198944.0 ( -119.70 by residue)
QMean score : 0.356

(partial model without unconserved sides chains):
PDB file : Tito_3COK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3COK-query.scw
PDB file : Tito_Scwrl_3COK.pdb: