Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPLLILTFVAAALAAPFDDDDKIVGGYNCEENSVPYQVSLNSGYHFCGGSLINEQWVVSAGHCYKSRIQVRLGEHNIEVLEGNEQFINAAKIIRHPQYDRKTLNNDIMLIKLSSRAVINARVSTISLPTAPPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCNGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTIAANS
1AND Chain:A ((1-223))
-----------------------IVGGYTCQENSVPYQVSLNSGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDHKTLNNDIMLIKLSSPVKLNARVATVALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCNGELQGIVSWGYGCALPDNPGVYTKVCNYVDWIQDTIAAN-
General information:
TITO was launched using:
RESULT:
Template:
1AND.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125705 for 1911 contacts (-65.8/contact) +
2D Compatibility (PS) -24287 + (NN) -9508 + (LL) 1716
1D Compatibility (HY) -29200 + (ID) 8900
Total energy: -195884.0 ( -102.50 by residue)
QMean score : 0.787
(partial model without unconserved sides chains):
PDB file :
Tito_1AND.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AND-query.scw
PDB file :
Tito_Scwrl_1AND.pdb
: