Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQFSGEKISGQRDLQKSKMRFTFTSRCLALFLLLNHPTPILPAFSNQTYPTIEPKPFLYVVGRKKMMDAQYK-CYDRMQQLPAYQGEGPYCNRTWDGWLCWDDTPAGVLSYQFCPDYFPDFDPSEKVTKYCDEKGVWFKHPENNRTWSNYTMCNAFTPEKLKNAYVLYYLAIVGHSLSIFTLVISLGIFV-FFRKLTTIFPLNWKYRKALSLGCQRVTLHKNMFLTYILNSMIIIIHLVEVVPNGELV-RRDPVSCKILHFFHQYMMACNYFWMLCEGIYLHTLIVVAVFTEKQRLRWYYLLGWGFPLVPTTIHAITRAVYFNDNCWLSVETHLLYIIHGPVMAALVVNFFFLLNIVRVLVTKMRETHEAESHMYLKAVKATMILVPLLGIQFVVFPWRPSNKMLGKIYDYVMHSLIHFQGFFVATIYCFCNNEVQTTVKRQWAQFKIQWNQRWGRRPSNRSARAAAAAAEAGDIPIYICHQEPRNEPANNQGEESAEIIPLNIIEQESSA |
| 4R33 Chain:A ((35-418)) | GDFVLPELEDVRAEAA-----TVDTRAVLALAEGEEPAESRAAVALALWEDRS-------IGTAELQAAAEARCGARRPRLHT-----------------------------FVPLYTTNYCDSE--CKMCSMRK------------GNHRLDRKFSG----RKEITEQLEILYHHEGVRGVGFLTGEYEDKHTRLASAFRIGWAIRTALDLGFERVYFN--------IGSM----EQDEIDVLGEWIGREDPVTMCV--FQESYDRETYRRFMGKTSVG-----VPKADFDRRVVSFDRWLDAGYRYVNPGV-----LVGLHDD---LSAELVSLVAHGDHLRSRGATADLSVPRMRPAM-KSRDTTRVGDDDYLRLMSVVAFTCP---EQRLVLTTREPQEFQDVALGLA--GVISPGSPDVAPY----RAGCEARNDEKSSQFLV---------ADLRRPRHILGRIEASGTPVD--------HFVNPAGEASR-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -269177 for 3293 contacts (-81.7/contact) +
2D Compatibility (PS) -39665 + (NN) -7079 + (LL) 9592
1D Compatibility (HY) -3600 + (ID) 3900
Total energy: -313829.0 ( -95.30 by residue)
QMean score : 0.235
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