Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGMNHSVVSEFVFMGLTNSREIQLLLFVFSLLFYFASMMGNLVIVFTVTMDAHLHSPMYFLLANLSIIDMAFCSITAPKMICDIFKKHKAISFRGCITQIFFSHALGGTEMVLLIAMAFDRYMAICKPLHYLTIMSPRMCLYFLATSSIIGLIHSLVQLVFVVDLPFCGPNIFDSFYCDLPRLLRLACTNTQELEFMVTVNSGLISVGSFVLLVISYIFILFTVWKHSSGGLAKALSTLSAHVTVVILFFGPLMFFYTWPSPTSHLDKYLAIFDAFITPFLNPVIYTFRNKDMKVAMRRLCSRLAHFTKIL |
| 1SRV Chain:A ((192-336)) | ----------GYQFDKGYISPYFVT---------NPETMEAVLEDAFILIVEKKVS--------------------------------------NVRELLPILEQVAQTGKPLLIIAEDVE-----------------GEALATLVVNKLRGTLS-----VAAVKAPGFG----DRRKEMLKDIAAVTGGTVISEELGFKLEN----------------------ATLSMLGRAERVRITK----DETTIVG-------GK--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SRV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168388 for 1161 contacts (-145.0/contact) +
2D Compatibility (PS) -15153 + (NN) 1869 + (LL) 15088
1D Compatibility (HY) 3600 + (ID) 1100
Total energy: -164084.0 ( -141.33 by residue)
QMean score : 0.198
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