Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFQASMRSPNMEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL--DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRR-ESVVNLENFRKQYVRRRWKLSFSIVSLCNHLTRSLMKKVHLRPDEDLRNCESDTEEDIARRKALHPRRRSSTS
2JAM Chain:A ((15-290))--------------------------EVLGSGAFSEVFLVKQRLTGKLFALKCIKK--------S----SLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEEN---SKIMITDFGLSKMEQNGI-MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWI---DGNTALHRDIYPSVSLQ-IQKNFAKS---------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2JAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123767 for 2008 contacts (-61.6/contact) +
2D Compatibility (PS) -27801 + (NN) -6112 + (LL) 6892
1D Compatibility (HY) -27200 + (ID) 5600
Total energy: -183588.0 ( -91.43 by residue)
QMean score : 0.469

(partial model without unconserved sides chains):
PDB file : Tito_2JAM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JAM-query.scw
PDB file : Tito_Scwrl_2JAM.pdb: