Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAPSPSGGGGSGGGSGSGTPGPVGSPAPGHPAVSSMQGKRKALKLNFANPPFKSTARFTLNPNPTGVQNPHIERLRTHSIESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME----------LMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILDQMPATPSSPMYVD |
| 3GGF Chain:A ((23-292)) | ---------------------------------------------------------------------------------------------------ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQ--IATMLKEIL-------------KGLDYLHSEKKI-HRDIKAANVLLSEQGDVKLADFGVA--------RNTFVGTPFWMAPEVIQQSA----YDSKADIWSLGITAIELAKGEPPNSDMHPM-RVLFLIPKNNPPTLVG----DFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKK----TSYLTELIDRFKRWKAEGHS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GGF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144442 for 1895 contacts (-76.2/contact) +
2D Compatibility (PS) -26119 + (NN) -8851 + (LL) 4096
1D Compatibility (HY) -20000 + (ID) 4750
Total energy: -200066.0 ( -105.58 by residue)
QMean score : 0.389
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