Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAGQPGHMPHGGSSNNLCHTLGPVHPPDPQRHPNTLSFRCSLADFQIEKKIGRGQFSEVYKATCLLDRKTVALKKVQIFEMMDAKARQDCVKEIGLLKQLNHPNIIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRL--IPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSETTAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKM--NLFSLCQKIEQCDYPPLPGEHYSEKLRELVSMCICPDPHQRPDIGYVHQVAKQMHIWMSST
3RK5 Chain:A ((9-237))-----------------------------------------MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-----TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP


General information:
TITO was launched using:
RESULT:

Template: 3RK5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109247 for 1636 contacts (-66.8/contact) +
2D Compatibility (PS) -23141 + (NN) -8579 + (LL) 840
1D Compatibility (HY) -19600 + (ID) 4300
Total energy: -164027.0 ( -100.26 by residue)
QMean score : 0.430

(partial model without unconserved sides chains):
PDB file : Tito_3RK5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RK5-query.scw
PDB file : Tito_Scwrl_3RK5.pdb: