Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGEKKLKAAVVLSGCGHLDGA----------EVREVVLSLLVLDQQEVEVKCFAPDINITQVVNHKTTEAVKEKRNVLVEAARVARSEICDLKEAKAEDFDMLVVPGGYGVAKNLSDLAEDKEVVTVIPEFERLVSEFFATKKPIGAICISPAIIVS--------ILSSKTSKGESKIKVTIGDDREKLI---------------EKLGGEHIKCDTG-LSIEDEEHNVFSCSAYMR---RDESTYSVYQGIKHMIDSMVKKTNKRI |
| 1U9C Chain:A ((1-219)) | ---MSKRVLMVV-----TNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQGGEVP-LDPRSIN---EKDPSWAEAEAAL-KHTARLSKDDAHGFDAIFLPGGHGTMFDFP----------DNETLQYVLQQFAEDGRIIAAV-HGPSGLVNATYKDGTPIVKG--------KTVTSFTDEEEREVGLDVHMPFLLESTLRLRGANFVRGGKWTDFSV-RDGNLITGQNPQSSRSTAEKVVAALEERE-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U9C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101179 for 1550 contacts (-65.3/contact) +
2D Compatibility (PS) -19499 + (NN) -6067 + (LL) 2720
1D Compatibility (HY) -2400 + (ID) 1550
Total energy: -127975.0 ( -82.56 by residue)
QMean score : 0.339
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