Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYRIVSSNILKYKNCEPKIDESAFIAGDSHIVGKVEIGREASIWFNCVIRGDIGSIKIGDGTNIQDGTVIHVDRNPGGDTIIGDMVTVGHFCMLHACTVHDKALIGMGSIVMDHAIVESEAMVAAGSLVTHRKVIKSGEMWAGRPAKFFKKISDEEVKYITQSAQNYIMLMKKYKN
3IXC Chain:A ((31-191))
-------------GVSPSVDSTAFIAGNARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHT-----GDTVIGKFVTIGHSCILHACTLGNNAFVGMGSIVMDRAVMEEGSMLAAGSLLTRGKIVKSGELWAGRPAKFLRMMTEEEILYLQKSAENYIALSRGYL-
General information:
TITO was launched using:
RESULT:
Template:
3IXC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146239 for 1348 contacts (-108.5/contact) +
2D Compatibility (PS) -17365 + (NN) -3697 + (LL) 812
1D Compatibility (HY) -20000 + (ID) 4350
Total energy: -190839.0 ( -141.57 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_3IXC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IXC-query.scw
PDB file :
Tito_Scwrl_3IXC.pdb
: