Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKYFLRIDNVRVVGIDVEIKKQSSVCEQMRFRIGRTSLLSTLSRVSGVVERRNAIDILACINIKAQHGSIKLMATDLDISIFASLAADVLTE-GEVKVSAHTLHDIVKKLPADLDVNFEVNDQGKLLISYGNANFSLPNVVLNKLPVLEEGDHKYDFTLLNTDLIDLLNKTKFAVSLDDTRYNLNGIYLHTDEQFLYCVATDGHRLSCVKKPKPQNINSEFGVIIPRKTVIELLKVLDDCD-EINIKLSDRKIKFTCGKYIIISKLIDGAFPDYKCVIPASQDKQMVVESSKLASVIDRVSVVVSDRIKSIEFSLQEKSLTLHSNSQECSDATEFIEVDYNGAPIEIGFNSRYLLDALSCIK-SKCKFSLSDSSSATVITDENDPNVLYIVMPVRT
4N94 Chain:A ((1-365))----------------------------MKFTVEREHLLKPLQQVSG-----PTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGE-RMLVRSGRSRFSLSTLPAADFPNLD-WQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVCSMPIGQSLPSH-SVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCENVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL


General information:
TITO was launched using:
RESULT:

Template: 4N94.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -266382 for 2888 contacts (-92.2/contact) +
2D Compatibility (PS) -38761 + (NN) -10416 + (LL) 3368
1D Compatibility (HY) -31600 + (ID) 5850
Total energy: -349641.0 ( -121.07 by residue)
QMean score : 0.525

(partial model without unconserved sides chains):
PDB file : Tito_4N94.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4N94-query.scw
PDB file : Tito_Scwrl_4N94.pdb: