Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTSAIFFSEGSYIVIMNNIIVKKFGGTSLTDL---TRVANLIKKDVDKGYRIIVVVSAIAGLTDQMVFQARQTLNLSHKQALSEYDVMLSAGEQISCGLLAITLLSIGVNAKSWLAWQLPIITDNSYSESKIKTIKIDHLKRSFAEGYTVAIIAGFQGIYD-DRITTFGRGGSDISAVALAVAFGVRVCEIFTDIDGIYTADPKIVPKARKLKSISYDEMLEMSSSGAKILHNRSVQLAMKHNIKVQVLSTFKEVEGTAVLHENDV-------LERHTITGITYSTNEALITFTNFAN----TLRTLKDMAGANIKIDMIHGS---------SIVISEFDIDLMKE---LLN-KN-------E-DYV-INNNAAKISIIGIGV------MSVMYHTLKFFSEKKIEILAITASEIKISIIVQRECAEALVRDLHTELMCTEGG |
| 3L76 Chain:A ((2-417)) | ------------------ALIVQKFGGTSVGTVERIQAVAQRIKRTVQGGNSLVVVVSAMGKSTDVLVDLAQQI--SPNP-CRREMDMLLSTGEQVSIALLSLALQEIDQPAISLTGAQVGIVTE-------ILEIRPDRLEHHLREG-KVVVVAGFQGI--HLEITTLGRGGSDTSAVALAAALKADFCEIYTDVPGILTTDPRLVPEAQLMAEITCDEMLELASLGAKVLHPRAVEIARNYGIPLVVRSSWSDEPGTKVVAPPVQNRSLVGLEIAKAVDGVEYDADQAKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVKDLLNTAEAVTSAIAPALRSYPEADQEAEIIVEKGIAKIAIAGAGMIGRPGIAAKMFKTL---ADVGVNIEMISTSEVKVSCVIDQRDADRAIAALSNAFGVTLSP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L76.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -281047 for 2915 contacts (-96.4/contact) +
2D Compatibility (PS) -39222 + (NN) -13707 + (LL) 2260
1D Compatibility (HY) -28400 + (ID) 6500
Total energy: -366616.0 ( -125.77 by residue)
QMean score : 0.507
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