Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKKDYYKLLGVDRNASTDEIKKAYKKLALKYHPDRNPGN-KEAEEKFKEITAAYEVLSDSEKRAGYDRYGHEGASGGFDFSQGFGSAGDFSDIFNDFFGGEFGSSSRSKAKRSTTGVPGADLRYDLEITLEDAFKGIQAPIHYVTNVKCDMCQGRGSEGATKPVQCHTCQGSGRIRTQQGFFTIERTCTTCYGEGEIIQNKCKKCNGSGRRRDEVNISVSIPKGIEEGAKVRVSGKGEAGAKGGKSGDLYVYVKITPHKIFTRNKADLHCKVPIRMTLAVLGGEIDVQSIDGAKIKVKVPEGTQTSTKLRCKEKGMPYMNSYARGDLYVQIIVETLNPNNLTKKQIELLKALEEEENASIQQQSEGFFSKVKKK
2DMX Chain:A ((8-80))--MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAGGGASGPSSG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2DMX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8294 for 431 contacts (-19.2/contact) +
2D Compatibility (PS) -8223 + (NN) -7986 + (LL) 14368
1D Compatibility (HY) -6000 + (ID) 2100
Total energy: -18235.0 ( -42.31 by residue)
QMean score : 0.808

(partial model without unconserved sides chains):
PDB file : Tito_2DMX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DMX-query.scw
PDB file : Tito_Scwrl_2DMX.pdb: