Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------MMCKLEWDDEINFGKISFLSHSHIPDRKTGLELAEKYGIDGVMIGSGIFHNPFAFEKEPREHT--------SKELLDLLRLHLSLFNKYEKDEIRQFKSL-RRFFKIYVRGIRALANFDIN---------------------- |
1VHN Chain:A ((5-309)) | VKVGLAPMAGYTDSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELLPQPHERNVAVQIFGSEPNELSEAARILSEKYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLE-------KRIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGKYSEPSREEILRTFERHLELLIKTKGERKAVVE--MRKFLAGYTKDLKGARRFREKVMKIEEVQILKEMFYNFIKEVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VHN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26661 for 606 contacts (-44.0/contact) +
2D Compatibility (PS) -11185 + (NN) -7407 + (LL) 512
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -49391.0 ( -81.50 by residue)
QMean score : 0.351
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