Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKKENTTTTLFVYEKPKSTISEKFRGIRSNIMFSKANGEVKRLLVTSEKPGAGKSTVVSNVAITYAQAGYKTLVIDGDMCKPTQNYIFNEQNNNGLS-------SLIIGRTTMSEAITSTEIENLDLLTAGPVPPNPSELI---GSERFKELVDLFNKRYDIIIVDTPPVNTVTDAQLYARAIKDSLLVIDSEKNDKNEVKKAKALMEKAGSN--ILGVILNKTKVDKSSSYYHYYGDE---------------------------- |
3K9G Chain:A ((26-267)) | ---------------------------------------KPKIITIASIKGGVGKSTSAIILATLLSK-NNKVLLIDMDTQASITSYFYEKIEKLGINFTKFNIYEILKENVDIDSTIINVD-NNLDLIPSYLTLHNFSEDKIEHKDFLLKTSLGTLYYKYDYIVIDTNPSLDVTLKNAL-LCSDYVIIPMTAEKWAVESLDLFNFFVRKLNLFLPIFLIITRFKKNRTHKTLFEILKTKDRFLGTISENKDYIKEYENILEIFLKKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54466 for 1419 contacts (-38.4/contact) +
2D Compatibility (PS) -20415 + (NN) -13470 + (LL) 2812
1D Compatibility (HY) -8800 + (ID) 1950
Total energy: -96289.0 ( -67.86 by residue)
QMean score : 0.392
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