Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKNILITGVHGYIGNALKDKLIEQGHQVDQINVRNQ--------------------LWKSTSF--KDYDVLIHTAALVHNNSPQARLSDYMQVNMLLTKQLAQKAKAEDVKQFIFMSTMAVYGKEGQVGKSDQIDTQTPMNPTTNYGISKKFAEQALQELISD-SFKVAIVRPPMIYGAHCPGNF-----------QRLMQLSK--R--LPII------PNINNQRSALYIKHLTAFIDQLISLE----VTGVYHPQDSFYFDTSSVMYEIRRQSHRKTVLINMPSVLNKYFNKLSVFRKLFGNLTYSNTLYENNNALEVIPGKMSL--VIADIMDETTTKDKA |
| 2C20 Chain:A ((2-322)) | --NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDV----DLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRA-------------GDPARLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQ----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106127 for 2234 contacts (-47.5/contact) +
2D Compatibility (PS) -29149 + (NN) -7419 + (LL) 1616
1D Compatibility (HY) -6400 + (ID) 2850
Total energy: -150329.0 ( -67.29 by residue)
QMean score : 0.444
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