Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITYDLIGNTPLVLLEHYSDD---KVKIYAKLEQWNPGGSVKDRLGKYLVEKAIQEGRVRAGQTIVEATAGNTGIGLAIAANRHHLKCKIFAPYGFSEEKINIMIALGADVSRTSQSEGMHGAQ----LAARSYAEKYGAVYMNQFESEHNPDTYFHTLGPELTSAL-QQIDYFVAGIGSGGTFTGTARYLKQHHVQC--YAVEPEGSV------LNGGPAHAHDTEGIGSEKWPIFLERRLVDGIFTIKDQDAFRNVKSLAINEGLLVGSSSGAALQGALNLKAQLSEGT-IVVVFPDGSDRYMSKQIFNYEENDYE |
| 3PC4 Chain:A ((56-358)) | ----EVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPGYTIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGSILARPAELNKTDVQFYEVEGIGYDFPPTVFDDTVVDVWTKIGDSDCFPMSRRLNAEEGLLCGGSSGGAMHAALEHARKLKKGQRCVVILPDGIRNYMTK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66701 for 2633 contacts (-25.3/contact) +
2D Compatibility (PS) -30941 + (NN) -8605 + (LL) 1272
1D Compatibility (HY) -21200 + (ID) 5250
Total energy: -131425.0 ( -49.91 by residue)
QMean score : 0.394
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