Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKTKIMGILNVTPDSFSDGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDVKISVDTFRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGN--------RDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDELVATEYPVLLATSRKRFTKEMMGYDTTPVERDEVTAATTAYGIMKGVRAVRVHNVELNAKLAKGIDFLKENENARHNLS
2DZA Chain:B ((26-272))
LDRVRLLGVLNLTPDS------------ALERAREMVAEGADILDLGAESTRP---PVPVEEEKRRLLPVLEAVLSLGVPVSVDTRKPEVAEEALKLGAHLLNDV-TGLRDERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGVP--QVVLDPGFGFGKLLEHNLALLRRLDEIVALGHPVLVGLSRKRTIGELSGVE-DPAQRVHGSVAAHLFAVMKGVRLLRVHDV------------------------
General information:
TITO was launched using:
RESULT:
Template:
2DZA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137314 for 1869 contacts (-73.5/contact) +
2D Compatibility (PS) -24644 + (NN) -17284 + (LL) 1668
1D Compatibility (HY) -17600 + (ID) 5000
Total energy: -200174.0 ( -107.10 by residue)
QMean score : 0.734
(partial model without unconserved sides chains):
PDB file :
Tito_2DZA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DZA-query.scw
PDB file :
Tito_Scwrl_2DZA.pdb
: