Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFAVIGNPISHSLSPVMHRANF----NSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIPHKERIIPYLDYVDEQAINAGAVNTVLIKDGKWIGYNTDGIGYVKGLHSVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRTMARFESWNLNINQISLADA--EKYLAEFDIVINTTPAGMAGNNESIINLKHLSPNTLMSDIVY---IPYKTPILEEAERKGNHIYNGLDMFVYQGAESFKIWTNKDADINSMKTAVLQQLKGE |
| 4FR5 Chain:B ((6-246)) | --FGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLES-HIKSEFLHLG-LSGANVTLPFKERAFQVCDKIKGIALECGAVNTLVLENDELVGYNTDALGFYLSLKQ--KNYQNA--LILGAGGSAKALACELKK-QGLQVSVLNRS-----SRGLDFFQRLGCDCFMEPPKSAFDLIINATSASL--HNELPLNKEVLKGYFKEGKLAYDLASGFLTPFLSLAKELKTPFQDGKDMLIYQAALSFEKFS-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FR5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93624 for 1974 contacts (-47.4/contact) +
2D Compatibility (PS) -24696 + (NN) -2513 + (LL) 3200
1D Compatibility (HY) -18000 + (ID) 4300
Total energy: -139933.0 ( -70.89 by residue)
QMean score : 0.386
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