Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDK-GDRSITLRPEGTAAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQKGRYRQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKHLKLVINSVGDMASRKEYNEALVKHFEPVIHEFCSDCQSRLHTNPMRILDCKVDRDKEAIKTAPRITDFLNEESKAYYEQVKAYLDDLGIPYIEDPNLVRGLDYYTHTAFELMMDNPNYDGAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLLLALEEEGIELDIEENLDLFIVTMGDQADRYAVKLLNHLRHNG----IKADKDYLQRKIKGQMKQADRLGAKFTIVIGDQELENNKIDVKNMTTGE--SETIELDALVEYFKK |
| 4E51 Chain:B ((36-454)) | -----KGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTPLFTR------DIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNML--YDGPKRLWYIGPMFRHER-----YRQFHQVGVEALGFAGPDADAEIVMMCQRLWEDLGLTGIKLEINSLGLAEERAAHRVELIKYLEQHAD------QRRLYTNPLRVL----PALQEIVRNAPKLIDFLGDVSRAHFEGLQRLLKANNVPFTINPRLVRGLDYYNLTVFEWVTD--------GTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILELLKEEHL-VPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAGASFKSQMKRADASGAAFAVIFGEDEVTNGTASVKPL----SVQQSVPVESLTEFL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E51.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189669 for 2868 contacts (-66.1/contact) +
2D Compatibility (PS) -40590 + (NN) -10083 + (LL) 900
1D Compatibility (HY) -33200 + (ID) 7900
Total energy: -280542.0 ( -97.82 by residue)
QMean score : 0.618
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