Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVYLRKIDNQILHNKRISIKKGILEHFFDKANNQDEVDMSGILSNYNDKVSILLATDPRLGGGIKRIISAEVDKIKENRLDYELKIDDILLFTYISYKK---YTLEIILLADTRYNVLNGLI--NNSKHLLVFSENETRTLDDGKINESVRIDGGKNIILYGVPGSGKSYTLQRDYCNNSVVEKIVFHPDYSYSDFVGQIMPSVDDSGIVSYKFNPG-PFTNILKKAYHNPQTKHVLVIDEINRGNVPAIFGEIFQLLDRLKHDKDGFKKGSSEYAINNTDIANIVHNDKNASIRIPSNLWIVATMNTSDQNVFTLDTAFQRRFSMQLVENSFENVDDDFKNMKILDTDMTWQKFCTTINEKIAQNNEGLSSMEDKRFGVYFVSIDDLKSKENFAHKVIKYLWDDVFKFDRNIIFNTTKFNTLEAVVKNFIKEKDRTQFDVFSDDIKELLFNV |
| 4XGU Chain:A ((4-424)) | ------PMKTLKNIHAEIRICQKFPKSTVQKRFSEFEELIKAASKNARNWKPISLNEL------FEKLVIGTCELRDGELFENDLTINPSNIHVYKLHKDGPLSSQLWQLPCVEFDSIWENLIYDSNLKNEVMSYVAALARLSEKHVNTKI-INVNRLILLTGPPGTG------KTSLCKGLAQHLSIRMNDKYS--KSVMLEINSHSLFSKWFSESGKLVQKMFDQIDELAEDEKCMVFVLID---------EVIRAVNALLTQIDRIRRRDNVLILCTSNLESTLDKALVDRADIVKNV----GQPSDFARYSMLKSSIMELARIGVVIDN--EVHTDYWPQDICDTKAPRNEFTEILFK-IAQEARGLSGRAISMLPTLVYSK-----------------------SPEETITLPNCMNLFLEAVKERLSRNN------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6449 for 2808 contacts (2.3/contact) +
2D Compatibility (PS) -37852 + (NN) -1124 + (LL) 5380
1D Compatibility (HY) -12000 + (ID) 2750
Total energy: -41897.0 ( -14.92 by residue)
QMean score : 0.139
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