Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKDYQKLIVYLCDFLEKEVQKKGFKKVVYGLSGGLDSAVVGVLCQKVFK-ENAHALLMPSSVSMPESRTDALNLCEKFSIPYTEYSIAPYDKIFGSHFKDASLTRKGNFCARLRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELAYYL-----------NIPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDIEALFQTKPIHLETLIQLGYAEILVKNIISRIQKNAFKLE-LPTIAKRFNPE |
| 3N05 Chain:A ((306-566)) | ----DEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFRTVSIEPMFDAYMASLG-LTGLAEENLQSRLRGTTLMAISNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSIFRLAEWRNRAAAERGQTPPIPEASITKP-----------------DYPVLDAILELYVDRD----TGADAIVAAGYDRELVVKTLRMVDTAEYKRRQYPPGTKISAKG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171954 for 1932 contacts (-89.0/contact) +
2D Compatibility (PS) -24674 + (NN) -7810 + (LL) 768
1D Compatibility (HY) -12000 + (ID) 3350
Total energy: -219020.0 ( -113.36 by residue)
QMean score : 0.455
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