Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKQEYKQLPKRAEVHSATEQFKDTIKTSLGLDLFKGLGLTIKEFFSPSVTIHYPMEQLPLSPRYRAVHHLQRLLDSGSERCIGCGLCEKICTSNCIRIITHKGED-----------------NRKKIDSYTINLGRCIYCGLCAEVCPE--LAIVMGNRFENASTQRSQYGSKSEFLTSEQDAKNCSHAEFLGFGAVSPNYNERMQATPLDYVQEPSKEESKEESPTSPESHKGDENV |
2C42 Chain:A ((681-767)) | --------------------------------------------------------------------------PQWVPENCIQCNQCAFVCPHSAILPVLAKEEELVGAPANFTALEAKGKELKGYKFRIQINTLDCMGCGNCADICPPKEKALVMQPLDTQRDAQVPNLEYAARIPVKSEVLPRDSLKGSQFQEPLMEFSGACSGCGETPYVRVITQLFGERMFIANATGCSSIWGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51899 for 417 contacts (-124.5/contact) +
2D Compatibility (PS) -7405 + (NN) -3823 + (LL) 5640
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -62137.0 ( -149.01 by residue)
QMean score : 0.354
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