Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHLESIVLRNFRNY-ENLELEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKDFIMWEKEEAKMEGRIAKHGQSVPLELAITQKGKRAKVNHLEQKKLSQYVGNLNVVIFAPEDLSLVKGAPGIRRRFLNMEIGQMQPIYLHNLSEYQRILQQRNQYLKMLQMKRKVDPILLDILTEQFADVAINLTKRRADFIQKLEAYAAPIHHQISRGLETLKIEYKASITLNGDDPEVWKADLLQKMESIKQREIDRGVTLIGPHRDDSLFYINGQNVQDFGSQGQQRTTALSIKLAEIDLIHEETGEYPVLLLDDVLSELDDYRQSHLLGAIEG--KVQTFVTTTSTSGIDHETLKQATTFYVEKGTVKKS------- |
1E69 Chain:A ((1-1164)) | MRLKKLYLKGFKSFGRPSLIGFSDRVTAIVGPNGSGKSNIIDAIKWV-FGEKFDMIFAGSENLPPAGSAYVELVFEENGEEITVARELKRTGENTYYLNGSPVRLKDIRDRFAGTGLGVDFYSIVG----------------------------------QGQIDRIVNAYQRVNESFNRFISLLFFG-----------------------------------GEGRLEISIRKPGRRDQKLSLL--------------------------------------SGGEKALVGLALLFALM-----EIKPSPFYVLDEVDSPLDDYNAERFKRLLKENSKHTQFIVITH----NKIVMEAADLLHGVTMVNGVSAIVPVEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53727 for 1936 contacts (-27.8/contact) +
2D Compatibility (PS) -26348 + (NN) -3138 + (LL) 8588
1D Compatibility (HY) -13600 + (ID) 2350
Total energy: -90575.0 ( -46.78 by residue)
QMean score : 0.381
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