Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LITHVIWDMGETLNTVPNTRYDHYPLDTYPEVVLRKDAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNELQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERQPLVAPPFVIPVWDLADVPEALLLLKKISS
3UM9 Chain:A ((94-225))
------------------------------SLTPFADVPQALQQLRAAGLKTAILSNGSRH---SIRQVVGNSGLTNSFDHLISVDEV----RLFKPHQKVYELAMDTLHLGESEILFVSCNS-WDATGAKYFGYPVCWINRSNGVFDQL---GVVPDIVVS--DVGVLASRFSP------
General information:
TITO was launched using:
RESULT:
Template:
3UM9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60616 for 950 contacts (-63.8/contact) +
2D Compatibility (PS) -13763 + (NN) -5011 + (LL) 2580
1D Compatibility (HY) -8400 + (ID) 1450
Total energy: -86660.0 ( -91.22 by residue)
QMean score : 0.458
(partial model without unconserved sides chains):
PDB file :
Tito_3UM9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UM9-query.scw
PDB file :
Tito_Scwrl_3UM9.pdb
: