Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHTNTGFPADFLWGGAAAANQFEGAYNVDGKGLSVQDV---TPKGGFGHITDGPTPDNLKLEGIDFYHRYKDDVKLFAEMGFKVFRTSIAWSRIFPNGDETEPNEAGLQFYDDLFDELLAHNIEPLITLSHYETPLHLSKTYDGWVNRKMIDFYENYVRTVFNRYKGKVKYWLTFNEINSI--------LHAPFMSGGISTSPDKLSQKDLY---QAVHHELVASALATKIGHEIMPEAQIGCMVLAMPTYPLTSNPDDIIAVMEAERKNYF--FSDVHVRGTYPGYMKRYFRENNIELDVTEEDLEILKNTVDFISFSYYMSTTETADESKRKAGAGNILGGVQNPYLEASEWGWQIDPQGLRVVLNEFWDRYQKP-LFIVENGLGAIDQLEKDENGNYTVNDDYRINYLSAHLSQVKEAIKDGVDLMGYTSWGCIDLVSASTAEMKKRYGFIYVDRNNDGTGTLNRYKKKSFDWYKNVIATNGEDL |
| 2JAL Chain:B ((28-465)) | ------FPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTP----GNVKNGDTGD----VACDHYNRWKEDIEIIEKLGVKAYRFSISWPRILPEG-TGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFAL-QLKGGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPWVVAIVGHLYGVHAPGM-------------RDIYVAFRAVHNLLRAHARAVKVFRETVKDGKIGIVFNNGYFEPASEKEEDIRAVRFMHQFNNYPLFLNPIYRGDYPELVLEFAREYLPE--NYKDDMSEIQEKIDFVGLNYYSGHLVKFDPD-----APAKVSFVERD-LPKTAMGWEIVPEGIYWILKKVKEEYNPPEVYITENGAAFDDVVSEDGR----VHDQNRIDYLKAHIGQAWKAIQEGVPLKGYFVWSLLDNFEWAEG-YSKRFGIVYVDYS-----TQKRIVKDSGYWYSNVVKNNG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JAL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184594 for 3650 contacts (-50.6/contact) +
2D Compatibility (PS) -44115 + (NN) -8584 + (LL) 276
1D Compatibility (HY) -31200 + (ID) 7600
Total energy: -275817.0 ( -75.57 by residue)
QMean score : 0.502
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