Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------MSDKLSQEQIDALLSQMSE-GKVVDESTEIGDFGRFHPYDFHKPEKFGAEHLESL----KTIASAFTKKSMEFVSQ-----------------------------RIRIPIHTEATLADQVSFASGYIETMPNDSYIF-----------CIIDLGNPELGQIIIELD----LAYIIYIHECLSGGNPK------------RKLSERR-----------------LLSVFEEL-----------TLKSILEKFCEALKDSFKSVHPISPEIVNIETNPALLRVTSPNDMMALVSVDIKSEFWISTMRIGVPFFSVEEIMNKLENVVEYTFDKRRNFDAEVEQELHQVEKEARIRVGEIKTTWKELNKLEVGDVLLTETHIRDTLK--GYVTEKWKFECYMGKSGNQKAVKFMRHTGRTEQER---------- |
| 1G59 Chain:A ((1-468)) | MVVTRIAPSPTGDPHVGTAYIALFNYAWARRNGGRFIVRIEDTDRARYVPGAEERILAALKWLGLSYDEGPDVA--APTGPYRQSERLPLYQKYAEELLKRGWAYRAFETPEELEQIRKEKGGYDGRARNIPPEEAEERARRGEPHVIRLKVPRPGTTEVKDELRGVVVYDNQEIPDVVLLKSDGYPTYHLANVVDDHLMGVTDVIRAEEWLVSTPIHVLLYRAFGWEAPRFYHMPLLRNPDKTKISKRKSHTSLDWYKAEGFLPEALRNYLCLMGFSMPDGREIFTLEEFIQAF--TWERVSLGGPVFDLEKLRWMNGKYIREVLSLEEVAERVKPFLREA-GLSWESEAYLRRAVELMRPRFDTLKEFPEKARYLFTEDYPVS-EKAQRKLEEGLPLLKELYPRLRAQEEWTEAALEALLRGFAAEKGVKLGQVAQPLRAALTGSLETPGLFEILALLGKERALRRLERALA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44689 for 2018 contacts (-22.1/contact) +
2D Compatibility (PS) -33287 + (NN) -4517 + (LL) 524
1D Compatibility (HY) -7600 + (ID) 2200
Total energy: -91769.0 ( -45.48 by residue)
QMean score : 0.247
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