Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-HKDINILQKDIFDLT--LSDLSDQNVVVDAYGVSPDE--AEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLE-----SKGLREAPYYPTARAQAKQL-EHLRSHQAEFSWTYISPSAMFEPGERT-GDYQI----GKDH-LLFGSDGNSFISMEDYAIAVLDEIERPNHLNERFTVAGK |
| 2X4G Chain:A ((13-258)) | VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFS-------EEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP-SGKSSYVLCKWALDEQAREQAR--NGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERG-RIGERYLLTG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63686 for 1535 contacts (-41.5/contact) +
2D Compatibility (PS) -21706 + (NN) -8796 + (LL) 296
1D Compatibility (HY) -5600 + (ID) 1650
Total energy: -101142.0 ( -65.89 by residue)
QMean score : 0.490
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