Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MYEKARQMMIEAHSGQVRKITGEPYFSHPLNVARILRRAGFREEVVVAGLLHDAVEDTEMTDADIRATFGDEVADLVASHTENKTLSWEERKAHTIEQVRTGNLEEKALIVADKLDNLTSV-KYALSSEGKSVWSYFKRGYDLQKWYNQGIKNNMEYGLNPSEIPPFFDEYARLVKWIFKK----------------------------------------------------------------------------------------------------------------------------------------- |
| 1VJ7 Chain:A ((5-371)) | INLTGEEVVALAAKYMNETDAAFVKKALDYATAAHFYQVRK-SGEPYIVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDNIEFDFGKDVRDIVDGVTKLGH--------RKMLMAMSKDIRVILVKLADRLHNMRTLKQERISRETMEIYAPLAHRLGI-----SRIKWELEDLAFRYLNETEFYKISHMMNEKRREREALVDDIVTKIKSYTTEQGLFGDVYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDVYAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTVYGPKGPIEIQIRTKEMHQVAEYGVAANWIKELVEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VJ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30246 for 1250 contacts (-24.2/contact) +
2D Compatibility (PS) -17417 + (NN) -5320 + (LL) 1376
1D Compatibility (HY) -10000 + (ID) 2250
Total energy: -63857.0 ( -51.09 by residue)
QMean score : 0.331
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