Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LNLKDTVKLANGVEMPRLGFGVWKVQDGDEAVNSVKWAIEAGYISIDTAAAYKNEEGVGQAIKES-----GIKREDLFVTTKLWNAEQGYESTLAAFDESLRKLELDYVDLYLIHWPVK--------------------GKFKDTWRAFEKLYKDKRVRAIGVCNFHEHHLKELMEDAEIAPMVNQIELHPQLTQEPLRKFCAENNIVVEAWSPLGNGK----------LLSNPEIKAIADAHGKSVAQVILRWDLQIGVVTIPKSVHQERIIQNADIFDFELTEEEVAKISGLNKDERTGPDPDNFNF |
1HQT Chain:A ((5-298)) | ----SCVLLHTGQKMPLIGLGTWKSEPG-QVKAAIKYALTVGYRHIDCAAIFGNELEIGEALQETVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTIRYDATHYKDTWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAWRDPNEPVLLEEPVVQALAEKYNRSPAQILLRWQVQRKVICIPKSVTPSRIPQNIQVFDFTFSPEEMKQLDALNKNLR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118137 for 2247 contacts (-52.6/contact) +
2D Compatibility (PS) -28136 + (NN) -10573 + (LL) -188
1D Compatibility (HY) -24800 + (ID) 5350
Total energy: -187184.0 ( -83.30 by residue)
QMean score : 0.558
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