Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDILQTANERMEQLAALMNKDIEQKIPAG----EKVKVGVDLGTSSIVFVVLDENNVPLF------GAFEFADAVRDGLVVNYRESVEVVTRLKNRAEKCLGISLTHASGAIPPG-----------TVGNNKKVVANVIESAGMEALYTIDEPTAAAAV-LDLQNGAVVDVGGG-TTGISVFENGEVIYTADEPT-GGTHMTLVLAG----YYGVPVEEAEQN------KRAQKDSSEHF-------------------SVMRPVVEKMAEITRVHLEKSPSEPLY----IVGGASAYSQFKDTFESYLKMPV------------------FQPNYPQYVTPLGIAMSSGSENL--------------------------------------------------- |
4I6M Chain:B ((3-439)) | ---------PFRQDSILIIYPRSQTTLVQFGLNEETFTVPELEIPTQIYRTTRQDGSYTYHSTNKDNKAELIKPIQNGEIIDISAFTQFLRLIFVSILSDRANKNQDAFEAELSNIPLLLITHHSWSQSDLEIITQYVFESLEINNLIQLPASLAATYSMISLQNCCIIDVGTHHTDIIPIVDYAQLDHLVSSIPMGGQSINDSLKKLLPQWDDDQIESLKKSPIFEVLSKNSDLEFNTFWDEKGNEIKVGKQRFQGCNNLIKNISNRVGLTLDNIDDINKAKAVWENIIIVGGTTSISGFKEALLGQLLKDHLIIEPEEEKSKREEEAKSFVPTIEYVQCPTVIKLAKYPDYFPEWKKSGYSEIIFLGAQIVSKQIFTHPKDTFYITREKYNMKGPAALWDVQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I6M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48290 for 1741 contacts (-27.7/contact) +
2D Compatibility (PS) -27945 + (NN) 4286 + (LL) 852
1D Compatibility (HY) -6400 + (ID) 2000
Total energy: -79497.0 ( -45.66 by residue)
QMean score : 0.229
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