Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKFAQKTIYQVYPKSFYDTTGDGTGDIPGITAKLDYLQKLGIEMIWLNPFYPSPQNDNGYDIADYTAVDPLFGTMDDVTTLIKEAKKRNIGIMIDLVLNHTSTEHPWFKKALAG--DPFYRDFYYFRPAK---ADGS--PPTNWVSKFGGNAWEKLPDSSEYYLHLYDVTQADLDWANPNVREALF-AVVNFWIDKGVEGFRLDVLNVIAKPKFLEDDFEGDGRR-------FYTDGPGIHAYLKELHE----RTFGDKPIITVGEMSSTDIDNCIRYSNPDEKELSMVFHFHHLKVDYPDGEKWRLADVNFENLKSIFHTWQVAMSD-------ENGWDALFWNNHDQPRALGRFASDKPEHYYHSATLLGATIHFMRGTPFVYMGEEIGMMNPKFPTIDDYVDVETLNHFD-ILQKNGLSEQEV---MEIIKERSRDNSRTPMQWDDSQ-NAGFT--TGTPWLKVADNANE-INVQTALSNKTSIFYFYQKLIALRKEHPVIQTGDYTPYLTEEDS--IIAYKRSNETTSLLSIHHFGSEKKKIQLPTEFLNAEVLLSNYERQRI-SSELELAPYETLTLIQ |
3AXI Chain:A ((15-587)) | ---WKEATFYQIYPASFKDSNDDGWGDMKGIASKLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLVINHCSSEHEWFKESRSSKTNP-KRDWFFWRPPKGYDAEGKPIPPNNWKSYFGGSAWTFDEKTQEFYLRLFCSTQPDLNWENEDCRKAIYESAVGYWLDHGVDGFRIDVGSLYSKVVGLPDAPVVDKNSTWQSSDPYTLNGPRIHEFHQEMNQFIRNRVKDGREIMTVGAMQHASDETKRLYTSASRHELSELFNFSHTDVGTSPLFRYNL--VPFE-----LKDWKIALAELFRYINGTDCWSTIYLENHDQPRSITRFGDDSPKNRVISGKLLSVLLSALTGTLYVYQGQELGQINFKNWPVEKYEDVEIRNNYNAIKEEHGENSEEMKKFLEAIALISRDHARTPMQWSREEPNAGFSGPSAKPWFYLNDSFREGINVEDEIKDPNSVLNFWKEALKFRKAHKDITVYGYDFEFIDLDNKKLFSFTKKYNNKTLFAALNFSSDATDFKIPNDDSSFKLEFGNYPKKEVDASSRTLKPWEGRIYI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AXI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186778 for 4614 contacts (-40.5/contact) +
2D Compatibility (PS) -57555 + (NN) -32043 + (LL) 980
1D Compatibility (HY) -38800 + (ID) 9700
Total energy: -323896.0 ( -70.20 by residue)
QMean score : 0.493
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