Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKPIVVGVTGGSGSGKTSVTKAICNHFSGH-------SILMIAQDVYYHDQANISFED--RLKVNYDHPLAFDTDLLISHIAALRRYESIEKPIYDYAKYTRKKEVEIQEPREVIILEGILILEDKRLRDLMDIKVYVDTDDDIRFIRRLLRDMKERGRTMDSVIEQYLSVVKPMHNEFIEPTKKFADIIIPEGGENHVAIDLMTTKIESILQKHV
2JEO Chain:A ((21-232))
--MRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDV-R---DLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILN---
General information:
TITO was launched using:
RESULT:
Template:
2JEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104900 for 1543 contacts (-68.0/contact) +
2D Compatibility (PS) -21399 + (NN) -7350 + (LL) 652
1D Compatibility (HY) -20400 + (ID) 3600
Total energy: -156997.0 ( -101.75 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_2JEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JEO-query.scw
PDB file :
Tito_Scwrl_2JEO.pdb
: