Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNVTIYDVAREANVSMATVSRVVNGNPNVKPVTRKKVLDVINQLGYRPNAVARGLASKRTTTVGVIIPDISNVFYAELARGIEDIATMYKYNIILSNSDENEDKELQVLNTLLGKQVDGIIYMGERISEQLQEEFDRSPAPVVLAGAVDMENKFASVNIDYKQATKEAVKRFVDNGHKQIAFVSGSLNEPV-NREMKLAGYKEALEEAGISYQEDYIIEAKYNYNAGVKVWAELSALS--KKPNAVVVADDELAIGILNAALDAGIKVPEDLEVMTSNNTKLTLMSRPQLSTIVQPLYDIGAVAMRLLTKLMTSEEVDEKTVILPHSEKLRGTTKEKK |
2HSG Chain:A ((2-332)) | -NVTIYDVAREASVSMATVSRVVNGNPNVKPSTRKKVLETIERLGYRPNAVARGLAS-KTTTVGVIIP--SNIFYAELARGIEDIATMYKYNIILSNSDQNQDKELHLLNNMLGKQVDGIIFMSGNVTEEHVEELKKSPVPVVLAASIESTNQIPSVTIDYEQAAFDAVQSLIDSGHKNIAFVSGTLEE-PINHAKKVKGYKRALTESGLPVRDSYIVEGDYTYDSGIEAVEK--LLEEDEKPTAIFVGTDEMALGVIHGAQDRGLNVPNDLEIIGFDNTRLSTMVRPQLTSVVQPMYDIGAVAMRLLTKYMNKETVDSSIVQLPHRIEFRQSTK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HSG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140276 for 2712 contacts (-51.7/contact) +
2D Compatibility (PS) -35857 + (NN) -20091 + (LL) 640
1D Compatibility (HY) -37200 + (ID) 10150
Total energy: -242934.0 ( -89.58 by residue)
QMean score : 0.536
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