Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADVNFKVVKQFIKTVSERAVGADVMKSLTPGQQVIKIVQEELTSLMGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDELKQVKEIAT------PTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPIKFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKDNSMTLDDFLEQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKNEKDNPDIINASRRKRIARGSGRPVQEINRLLKQFAEMKKMMKQMTGGGKGKKGKNPFGNFKMPF |
2IYL Chain:D ((95-282)) | -----------------------------------------------------------------------------------------------------------------KTTTIAKLGRYYQN-LGKKVMFCAGDT------TQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAMKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQ--LEQAKKFHEAVGLTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALL---------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IYL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76804 for 1291 contacts (-59.5/contact) +
2D Compatibility (PS) -18590 + (NN) -9212 + (LL) 18724
1D Compatibility (HY) -16000 + (ID) 3350
Total energy: -105232.0 ( -81.51 by residue)
QMean score : 0.624
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